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Bioinformatician's Replies

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  • in reply to: We can ask our data: How am I doing with my health today? #50034
    Bioinformatician
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    Treatments to life-threatening diseases already exists but they are not personalized, not customized to a person and his or her (meta/epi)genome, lifestyle, etc. This should change in the next 5 years with moire omics in the clinic and drug research. The best solution is not to need treatment for many diseases because people have figured out how to stay healthy.

    in reply to: How accurate is genotyping? #50029
    Bioinformatician
    Participant

    @jasonblu: I wonder what you meant by “Based on what I read, these types of test pull from prominent genes. This means as the percentages get smaller, there is more likely to be room for error” What do you call a prominent gene? Which percentages?

    in reply to: How to know if I'm prone to cancer or not? #50028
    Bioinformatician
    Participant

    Epigenetic markers are not yet currently measured in the clinic but it involves detecting methylation of DNA. The breast cancer genes’ promoter methylation of seven genes were evaluated in a recent study (APC, BRCA1, CCND2, FOXA1, PSAT1, RASSF1A and SCGB3A1) by measuring Methylation levels in primary BrC tissues by quantitative methylation-specific polymerase chain reaction (QMSP) and in circulating cell-free DNA (ccfDNA) by multiplex QMSP
    The gene-panel APC, FOXA1, RASSF1A, SCGB3A1 discriminated normal from cancerous tissue with high accuracy (95.55%) high PSAT1-methylation levels [>percentile 75 (P75)] were associated with longer disease-free survival, whereas higher FOXA1-methylation levels (>P75) associated with shorter disease-specific survival.

    The study: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6262630/

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